Are any of the automated SEO programs that do submissions of your entire website useful? Or are they just scams?
Matt LeVeque
With SEO there is no substitute for human input and interaction. Full-on site submissions are also somewhat dated since the engines pick up new sites/pages within hours in most cases.
I would recommend using Google Webmaster Central to support your SEO efforts. You have the ability to submit xml sitemaps and remove/exclude indexed pages if they were improperly indexed or outdated.